Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.09■□□□□ 0.01
THBS1P07996 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 AC004877.2-201ENST00000623941 599 ntBASIC15.09■□□□□ 0.01
THBS1P07996 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 BCAR1-209ENST00000546196 1340 ntBASIC15.09■□□□□ 0.01
THBS1P07996 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
THBS1P07996 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.08■□□□□ 0.01
THBS1P07996 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 AC112504.1-201ENST00000623415 1841 ntBASIC15.08■□□□□ 0.01
THBS1P07996 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.08■□□□□ 0.01
THBS1P07996 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
THBS1P07996 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
THBS1P07996 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.08■□□□□ 0
THBS1P07996 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
THBS1P07996 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.08■□□□□ 0
THBS1P07996 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.08■□□□□ 0
THBS1P07996 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 BX842568.4-201ENST00000421222 227 ntBASIC15.08■□□□□ 0
THBS1P07996 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.08■□□□□ 0
THBS1P07996 AC245100.5-201ENST00000452108 331 ntBASIC15.08■□□□□ 0
THBS1P07996 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.08■□□□□ 0
THBS1P07996 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.08■□□□□ 0
THBS1P07996 KRT19P2-202ENST00000557173 1012 ntBASIC15.08■□□□□ 0
THBS1P07996 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.08■□□□□ 0
THBS1P07996 AL365330.1-201ENST00000607459 531 ntBASIC15.08■□□□□ 0
THBS1P07996 AC027601.4-201ENST00000611259 610 ntBASIC15.08■□□□□ 0
THBS1P07996 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
THBS1P07996 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
THBS1P07996 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.08■□□□□ 0
THBS1P07996 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.08■□□□□ 0
THBS1P07996 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.08■□□□□ 0
THBS1P07996 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
THBS1P07996 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
THBS1P07996 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
THBS1P07996 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.08■□□□□ 0
THBS1P07996 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
THBS1P07996 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.08■□□□□ 0
THBS1P07996 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.08■□□□□ 0
THBS1P07996 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
THBS1P07996 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
THBS1P07996 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
THBS1P07996 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
THBS1P07996 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
THBS1P07996 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
THBS1P07996 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
THBS1P07996 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
THBS1P07996 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
THBS1P07996 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
THBS1P07996 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.07■□□□□ 0
THBS1P07996 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 AC010491.1-201ENST00000563101 2797 ntBASIC15.07■□□□□ 0
THBS1P07996 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.07■□□□□ 0
THBS1P07996 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.07■□□□□ 0
THBS1P07996 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
THBS1P07996 AL591424.1-201ENST00000442569 1213 ntBASIC15.07■□□□□ 0
THBS1P07996 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.07■□□□□ 0
THBS1P07996 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.07■□□□□ 0
THBS1P07996 AL161645.1-201ENST00000622716 1255 ntBASIC15.07■□□□□ 0
THBS1P07996 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.07■□□□□ 0
THBS1P07996 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.07■□□□□ 0
THBS1P07996 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
THBS1P07996 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
THBS1P07996 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
THBS1P07996 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms