Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KRT8P44-201ENST00000441609 1350 ntBASIC17.17■□□□□ 0.34
RB1P06400 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.17■□□□□ 0.34
RB1P06400 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.17■□□□□ 0.34
RB1P06400 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.17■□□□□ 0.34
RB1P06400 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.17■□□□□ 0.34
RB1P06400 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RB1P06400 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RB1P06400 AC005332.8-201ENST00000622750 2735 ntBASIC17.17■□□□□ 0.34
RB1P06400 AC093525.8-201ENST00000624099 1342 ntBASIC17.17■□□□□ 0.34
RB1P06400 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RB1P06400 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.17■□□□□ 0.34
RB1P06400 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RB1P06400 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.16■□□□□ 0.34
RB1P06400 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.16■□□□□ 0.34
RB1P06400 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RB1P06400 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RB1P06400 AL355994.2-201ENST00000447882 704 ntBASIC17.16■□□□□ 0.34
RB1P06400 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 FO681548.1-201ENST00000455617 1132 ntBASIC17.16■□□□□ 0.34
RB1P06400 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.16■□□□□ 0.34
RB1P06400 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.16■□□□□ 0.34
RB1P06400 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.16■□□□□ 0.34
RB1P06400 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 CU634019.7-201ENST00000624153 1185 ntBASIC17.16■□□□□ 0.34
RB1P06400 FP236241.2-201ENST00000624906 1185 ntBASIC17.16■□□□□ 0.34
RB1P06400 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RB1P06400 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RB1P06400 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RB1P06400 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.16■□□□□ 0.34
RB1P06400 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
RB1P06400 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RB1P06400 AL136982.4-201ENST00000437689 1740 ntBASIC17.16■□□□□ 0.34
RB1P06400 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RB1P06400 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.15■□□□□ 0.34
RB1P06400 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RB1P06400 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.15■□□□□ 0.34
RB1P06400 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RB1P06400 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.15■□□□□ 0.34
RB1P06400 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RB1P06400 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.15■□□□□ 0.34
RB1P06400 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.15■□□□□ 0.34
RB1P06400 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.15■□□□□ 0.34
RB1P06400 ENPP7P5-201ENST00000541031 1031 ntBASIC17.15■□□□□ 0.34
RB1P06400 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.15■□□□□ 0.34
RB1P06400 MIR5189-201ENST00000577370 114 ntBASIC17.15■□□□□ 0.34
RB1P06400 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
RB1P06400 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 GGT4P-201ENST00000623672 1708 ntBASIC17.15■□□□□ 0.34
RB1P06400 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
RB1P06400 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms