Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RN7SL837P-201ENST00000463010 287 ntBASIC19.47■□□□□ 0.71
COL1A1P02452 SDHAP3-202ENST00000515467 728 ntBASIC19.47■□□□□ 0.71
COL1A1P02452 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
COL1A1P02452 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.47■□□□□ 0.71
COL1A1P02452 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.47■□□□□ 0.71
COL1A1P02452 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL1A1P02452 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
COL1A1P02452 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
COL1A1P02452 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL1A1P02452 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 AC020916.1-201ENST00000587762 1774 ntBASIC19.46■□□□□ 0.71
COL1A1P02452 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL1A1P02452 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COL1A1P02452 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 TTTY23B-201ENST00000442790 549 ntBASIC19.46■□□□□ 0.71
COL1A1P02452 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
COL1A1P02452 KRT17P8-201ENST00000540749 863 ntBASIC19.46■□□□□ 0.71
COL1A1P02452 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
COL1A1P02452 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
COL1A1P02452 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.46■□□□□ 0.71
COL1A1P02452 MIR6069-201ENST00000620069 79 ntBASIC19.46■□□□□ 0.71
COL1A1P02452 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A1P02452 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A1P02452 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A1P02452 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 BNIP3P1-202ENST00000550043 1585 ntBASIC19.45■□□□□ 0.7
COL1A1P02452 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.45■□□□□ 0.7
COL1A1P02452 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A1P02452 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL1A1P02452 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.45■□□□□ 0.7
COL1A1P02452 MEP1AP4-201ENST00000423244 1087 ntBASIC19.45■□□□□ 0.7
COL1A1P02452 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.45■□□□□ 0.7
COL1A1P02452 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.45■□□□□ 0.7
COL1A1P02452 RAB43P1-201ENST00000561790 589 ntBASIC19.45■□□□□ 0.7
COL1A1P02452 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.45■□□□□ 0.7
COL1A1P02452 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.45■□□□□ 0.7
COL1A1P02452 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.45■□□□□ 0.7
COL1A1P02452 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.45■□□□□ 0.7
COL1A1P02452 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
COL1A1P02452 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
COL1A1P02452 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL1A1P02452 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A1P02452 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A1P02452 Z97205.2-201ENST00000564697 1639 ntBASIC19.44■□□□□ 0.7
COL1A1P02452 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A1P02452 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.44■□□□□ 0.7
COL1A1P02452 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
COL1A1P02452 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A1P02452 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A1P02452 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
COL1A1P02452 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.44■□□□□ 0.7
COL1A1P02452 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A1P02452 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
COL1A1P02452 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
COL1A1P02452 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A1P02452 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.43■□□□□ 0.7
COL1A1P02452 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 TPRX2P-201ENST00000535362 881 ntBASIC19.43■□□□□ 0.7
COL1A1P02452 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.43■□□□□ 0.7
COL1A1P02452 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.43■□□□□ 0.7
COL1A1P02452 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A1P02452 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms