Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 AL391005.1-201ENST00000623953 2435 ntBASIC17.59■□□□□ 0.41
HLA-DRAP01903 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DRAP01903 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-DRAP01903 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-DRAP01903 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.58■□□□□ 0.41
HLA-DRAP01903 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DRAP01903 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 FAM58DP-201ENST00000428076 619 ntBASIC17.58■□□□□ 0.4
HLA-DRAP01903 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 AC026691.1-201ENST00000602502 2017 ntBASIC17.58■□□□□ 0.4
HLA-DRAP01903 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DRAP01903 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HLA-DRAP01903 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 AC254562.1-201ENST00000417586 456 ntBASIC17.57■□□□□ 0.4
HLA-DRAP01903 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 AC004835.2-201ENST00000603762 682 ntBASIC17.57■□□□□ 0.4
HLA-DRAP01903 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DRAP01903 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DRAP01903 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 AL513523.2-202ENST00000427283 2040 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 KRT18P32-201ENST00000424695 1287 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 RPS8P6-201ENST00000426177 609 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 CNN2P11-201ENST00000429351 262 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 AL365330.1-201ENST00000607459 531 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms