Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFBP01127 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PDGFBP01127 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDGFBP01127 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDGFBP01127 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 AL662890.1-201ENST00000396818 632 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 AC253536.4-201ENST00000440539 267 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFBP01127 Z93015.1-201ENST00000451718 390 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 AL591846.1-201ENST00000451736 433 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFBP01127 AC009486.1-201ENST00000569860 813 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFBP01127 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PDGFBP01127 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.24■□□□□ 0.19
PDGFBP01127 GNRHR2-203ENST00000581100 1187 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.24■□□□□ 0.19
PDGFBP01127 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 AC005695.3-201ENST00000614522 232 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 AC005252.2-201ENST00000624630 1141 ntBASIC16.24■□□□□ 0.19
PDGFBP01127 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFBP01127 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFBP01127 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PDGFBP01127 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFBP01127 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFBP01127 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFBP01127 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.23■□□□□ 0.19
PDGFBP01127 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDGFBP01127 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 C1QBPP1-201ENST00000400117 770 ntBASIC16.23■□□□□ 0.19
PDGFBP01127 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.23■□□□□ 0.19
PDGFBP01127 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFBP01127 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFBP01127 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.23■□□□□ 0.19
PDGFBP01127 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFBP01127 MIR4741-201ENST00000579822 90 ntBASIC16.23■□□□□ 0.19
PDGFBP01127 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.23■□□□□ 0.19
PDGFBP01127 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PDGFBP01127 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFBP01127 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.23■□□□□ 0.19
PDGFBP01127 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFBP01127 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDGFBP01127 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
PDGFBP01127 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFBP01127 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFBP01127 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.22■□□□□ 0.19
PDGFBP01127 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFBP01127 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDGFBP01127 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFBP01127 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms