Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NKX2-2O95096 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX2-2O95096 AC069224.1-201ENST00000566372 1715 ntBASIC15.09■□□□□ 0.01
NKX2-2O95096 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX2-2O95096 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX2-2O95096 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NKX2-2O95096 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
NKX2-2O95096 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX2-2O95096 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX2-2O95096 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.08■□□□□ 0.01
NKX2-2O95096 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX2-2O95096 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX2-2O95096 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.08■□□□□ 0.01
NKX2-2O95096 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX2-2O95096 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
NKX2-2O95096 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.08■□□□□ 0
NKX2-2O95096 CEND1P1-201ENST00000451006 455 ntBASIC15.08■□□□□ 0
NKX2-2O95096 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.08■□□□□ 0
NKX2-2O95096 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.08■□□□□ 0
NKX2-2O95096 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.08■□□□□ 0
NKX2-2O95096 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 AC084121.4-201ENST00000641598 221 ntBASIC15.08■□□□□ 0
NKX2-2O95096 AF228730.8-201ENST00000642140 221 ntBASIC15.08■□□□□ 0
NKX2-2O95096 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.08■□□□□ 0
NKX2-2O95096 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.08■□□□□ 0
NKX2-2O95096 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NKX2-2O95096 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.08■□□□□ 0
NKX2-2O95096 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 AC008677.1-201ENST00000519230 1561 ntBASIC15.07■□□□□ 0
NKX2-2O95096 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 HAUS4P1-201ENST00000406739 1145 ntBASIC15.07■□□□□ 0
NKX2-2O95096 BX842568.4-201ENST00000421222 227 ntBASIC15.07■□□□□ 0
NKX2-2O95096 GPX1P2-201ENST00000429271 606 ntBASIC15.07■□□□□ 0
NKX2-2O95096 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 IGHV3-62-201ENST00000520057 340 ntBASIC15.07■□□□□ 0
NKX2-2O95096 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 AC024267.1-201ENST00000582320 895 ntBASIC15.07■□□□□ 0
NKX2-2O95096 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms