Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.11■□□□□ 0.33
BEST1O76090 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.11■□□□□ 0.33
BEST1O76090 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 MTND6P24-201ENST00000440466 518 ntBASIC17.11■□□□□ 0.33
BEST1O76090 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.11■□□□□ 0.33
BEST1O76090 AL365330.1-201ENST00000607459 531 ntBASIC17.11■□□□□ 0.33
BEST1O76090 SPDYE12P-201ENST00000618416 771 ntBASIC17.11■□□□□ 0.33
BEST1O76090 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
BEST1O76090 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST1O76090 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BEST1O76090 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 AL136982.4-201ENST00000437689 1740 ntBASIC17.1■□□□□ 0.33
BEST1O76090 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BEST1O76090 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST1O76090 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST1O76090 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BEST1O76090 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST1O76090 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST1O76090 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST1O76090 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST1O76090 AL138828.2-201ENST00000615812 383 ntBASIC17.1■□□□□ 0.33
BEST1O76090 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST1O76090 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BEST1O76090 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST1O76090 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST1O76090 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST1O76090 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BEST1O76090 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.09■□□□□ 0.33
BEST1O76090 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.09■□□□□ 0.33
BEST1O76090 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST1O76090 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST1O76090 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms