Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
NDUFS3O75489 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFS3O75489 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFS3O75489 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 MIR940-201ENST00000401276 94 ntBASIC16.36■□□□□ 0.21
NDUFS3O75489 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
NDUFS3O75489 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFS3O75489 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.36■□□□□ 0.21
NDUFS3O75489 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 AL078644.1-201ENST00000609881 752 ntBASIC16.36■□□□□ 0.21
NDUFS3O75489 AL161645.1-201ENST00000622716 1255 ntBASIC16.36■□□□□ 0.21
NDUFS3O75489 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFS3O75489 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFS3O75489 AC092919.2-201ENST00000623631 1645 ntBASIC16.36■□□□□ 0.21
NDUFS3O75489 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFS3O75489 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFS3O75489 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 PCDHA1-201ENST00000378133 2726 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 AC016027.1-202ENST00000607927 1699 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 AC002056.1-201ENST00000395613 760 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFS3O75489 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFS3O75489 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 AC092865.6-201ENST00000642101 219 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
NDUFS3O75489 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFS3O75489 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 U82695.1-201ENST00000635752 1889 ntBASIC16.35■□□□□ 0.21
NDUFS3O75489 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
NDUFS3O75489 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFS3O75489 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFS3O75489 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 AC063926.3-201ENST00000624734 5658 ntBASIC16.34■□□□□ 0.21
NDUFS3O75489 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFS3O75489 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NDUFS3O75489 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFS3O75489 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NDUFS3O75489 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFS3O75489 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFS3O75489 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFS3O75489 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms