Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH16O75309 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 AC104819.1-201ENST00000504587 486 ntBASIC16.59■□□□□ 0.25
CDH16O75309 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH16O75309 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH16O75309 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH16O75309 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH16O75309 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CDH16O75309 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH16O75309 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH16O75309 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDH16O75309 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH16O75309 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.58■□□□□ 0.24
CDH16O75309 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH16O75309 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH16O75309 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH16O75309 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 FAM45BP-202ENST00000592932 1624 ntBASIC16.58■□□□□ 0.24
CDH16O75309 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH16O75309 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH16O75309 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH16O75309 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDH16O75309 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH16O75309 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH16O75309 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH16O75309 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 AC005622.1-201ENST00000636801 1703 ntBASIC16.57■□□□□ 0.24
CDH16O75309 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH16O75309 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH16O75309 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH16O75309 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH16O75309 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH16O75309 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH16O75309 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH16O75309 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms