Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC093525.9-201ENST00000624961 1746 ntBASIC16.23■□□□□ 0.19
PCDHGA12O60330 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC009477.1-201ENST00000452936 217 ntBASIC16.23■□□□□ 0.19
PCDHGA12O60330 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 AL008721.1-201ENST00000609964 604 ntBASIC16.23■□□□□ 0.19
PCDHGA12O60330 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA12O60330 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA12O60330 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC116353.5-201ENST00000638148 1699 ntBASIC16.22■□□□□ 0.19
PCDHGA12O60330 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AL353705.2-201ENST00000428243 662 ntBASIC16.22■□□□□ 0.19
PCDHGA12O60330 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA12O60330 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA12O60330 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 AL162727.3-201ENST00000635661 2787 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms