Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CEP290O15078 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CEP290O15078 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.42■□□□□ 0.38
CEP290O15078 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CEP290O15078 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CEP290O15078 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.41■□□□□ 0.38
CEP290O15078 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.41■□□□□ 0.38
CEP290O15078 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 TARDBPP1-201ENST00000442013 1203 ntBASIC17.41■□□□□ 0.38
CEP290O15078 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.41■□□□□ 0.38
CEP290O15078 CTBP2P4-201ENST00000513884 920 ntBASIC17.41■□□□□ 0.38
CEP290O15078 PRKXP1-201ENST00000561423 1122 ntBASIC17.41■□□□□ 0.38
CEP290O15078 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CEP290O15078 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CEP290O15078 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.41■□□□□ 0.38
CEP290O15078 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CEP290O15078 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.41■□□□□ 0.38
CEP290O15078 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.41■□□□□ 0.38
CEP290O15078 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CEP290O15078 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 FO393414.2-201ENST00000405153 598 ntBASIC17.4■□□□□ 0.38
CEP290O15078 AC022217.1-201ENST00000521069 738 ntBASIC17.4■□□□□ 0.38
CEP290O15078 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CEP290O15078 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CEP290O15078 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
CEP290O15078 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CEP290O15078 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.4■□□□□ 0.38
CEP290O15078 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEP290O15078 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.4■□□□□ 0.38
CEP290O15078 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CEP290O15078 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.39■□□□□ 0.37
CEP290O15078 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.39■□□□□ 0.37
CEP290O15078 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CEP290O15078 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.39■□□□□ 0.37
CEP290O15078 AC141586.1-203ENST00000567242 366 ntBASIC17.39■□□□□ 0.37
CEP290O15078 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.39■□□□□ 0.37
CEP290O15078 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.39■□□□□ 0.37
CEP290O15078 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.39■□□□□ 0.37
CEP290O15078 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CEP290O15078 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEP290O15078 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms