Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TSPAN4O14817 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TSPAN4O14817 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 AC009090.5-201ENST00000624886 2285 ntBASIC13.87□□□□□ -0.19
TSPAN4O14817 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 MIR149-201ENST00000384879 89 ntBASIC13.87□□□□□ -0.19
TSPAN4O14817 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.87□□□□□ -0.19
TSPAN4O14817 RASA4DP-201ENST00000460726 1199 ntBASIC13.87□□□□□ -0.19
TSPAN4O14817 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TSPAN4O14817 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.87□□□□□ -0.19
TSPAN4O14817 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TSPAN4O14817 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TSPAN4O14817 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TSPAN4O14817 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.86□□□□□ -0.19
TSPAN4O14817 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TSPAN4O14817 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 CICP8-201ENST00000455800 2813 ntBASIC13.86□□□□□ -0.19
TSPAN4O14817 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TSPAN4O14817 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TSPAN4O14817 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.86□□□□□ -0.19
TSPAN4O14817 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 AL590326.2-201ENST00000625139 305 ntBASIC13.86□□□□□ -0.19
TSPAN4O14817 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TSPAN4O14817 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TSPAN4O14817 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TSPAN4O14817 AC009102.3-201ENST00000623118 1491 ntBASIC13.86□□□□□ -0.19
TSPAN4O14817 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TSPAN4O14817 PPT1-215ENST00000641471 2368 ntBASIC13.86□□□□□ -0.19
TSPAN4O14817 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
TSPAN4O14817 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TSPAN4O14817 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.85□□□□□ -0.19
TSPAN4O14817 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TSPAN4O14817 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms