Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PIK3C2AO00443 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PIK3C2AO00443 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.54■■□□□ 1.04
PIK3C2AO00443 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.54■■□□□ 1.04
PIK3C2AO00443 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PIK3C2AO00443 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PIK3C2AO00443 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 CSF2RBP1-201ENST00000447905 391 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 VDAC1P7-201ENST00000462417 847 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 BTNL10-201ENST00000595971 695 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 AC244669.2-201ENST00000612320 853 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 ACTG1P3-201ENST00000431775 1114 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 SLC25A47P1-201ENST00000531577 414 ntBASIC21.53■■□□□ 1.04
PIK3C2AO00443 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PIK3C2AO00443 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PIK3C2AO00443 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PIK3C2AO00443 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PIK3C2AO00443 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AC012441.1-201ENST00000446669 685 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AL583810.1-201ENST00000553344 1045 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 AC107373.2-201ENST00000607735 490 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 AL022328.1-201ENST00000610050 478 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PIK3C2AO00443 TUBB1P2-201ENST00000422712 1306 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 TUBB1P1-201ENST00000503144 1300 ntBASIC21.51■■□□□ 1.03
PIK3C2AO00443 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PIK3C2AO00443 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms