Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00473A8K010 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 AC092384.3-202ENST00000564646 2873 ntBASIC13.35□□□□□ -0.27
LINC00473A8K010 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00473A8K010 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00473A8K010 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LINC00473A8K010 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00473A8K010 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00473A8K010 AC004870.1-201ENST00000315132 882 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00473A8K010 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00473A8K010 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 VN2R19P-201ENST00000442399 1052 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00473A8K010 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00473A8K010 AP002469.2-201ENST00000531724 424 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.34□□□□□ -0.27
LINC00473A8K010 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 AC104692.2-201ENST00000603054 253 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LINC00473A8K010 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00473A8K010 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 AP003680.1-201ENST00000598970 3660 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 TSPY26P-202ENST00000565928 3884 ntBASIC13.34□□□□□ -0.27
LINC00473A8K010 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00473A8K010 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00473A8K010 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.33□□□□□ -0.27
LINC00473A8K010 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00473A8K010 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LINC00473A8K010 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC092919.2-201ENST00000623631 1645 ntBASIC13.33□□□□□ -0.28
LINC00473A8K010 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00473A8K010 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC009947.1-201ENST00000444350 727 ntBASIC13.33□□□□□ -0.28
LINC00473A8K010 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 UNC93B6-202ENST00000528242 690 ntBASIC13.33□□□□□ -0.28
LINC00473A8K010 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00473A8K010 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC116407.3-201ENST00000623905 1129 ntBASIC13.33□□□□□ -0.28
LINC00473A8K010 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms