Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PMS2P4-201ENST00000412466 1052 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 FAM58CP-201ENST00000435741 640 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 AP002472.1-201ENST00000577490 586 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 AL078644.1-201ENST00000609881 752 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 TSPY26P-202ENST00000565928 3884 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.3□□□□□ -0.44
KNCNA6PVL3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KNCNA6PVL3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
KNCNA6PVL3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms