Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 AC140658.5-201ENST00000438532 169 ntBASIC18.71■□□□□ 0.59
CLIC4Q9Y696 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 HYMAI-201ENST00000635591 3347 ntBASIC18.71■□□□□ 0.58
CLIC4Q9Y696 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 MIR648-201ENST00000385046 94 ntBASIC18.7■□□□□ 0.58
CLIC4Q9Y696 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 AL078644.1-201ENST00000609881 752 ntBASIC18.7■□□□□ 0.58
CLIC4Q9Y696 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 IL9RP2-201ENST00000423948 1312 ntBASIC18.7■□□□□ 0.58
CLIC4Q9Y696 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIC4Q9Y696 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIC4Q9Y696 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 FDX1P1-201ENST00000449115 551 ntBASIC18.68■□□□□ 0.58
CLIC4Q9Y696 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLIC4Q9Y696 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms