Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC140658.5-201ENST00000438532 169 ntBASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AL592309.1-201ENST00000443127 649 ntBASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AF228730.6-201ENST00000641497 218 ntBASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC084121.3-201ENST00000641716 218 ntBASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 AC105233.6-201ENST00000642093 218 ntBASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AC005052.1-201ENST00000625181 2492 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AC015922.1-201ENST00000421102 1152 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 CNN2P2-201ENST00000443536 909 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 CNN2P3-201ENST00000450201 906 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AC079140.1-201ENST00000508039 487 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AL136317.3-201ENST00000618497 906 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AL035252.4-201ENST00000624174 288 ntBASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB1Q9Y5F3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 AC236430.1-201ENST00000402231 743 ntBASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 KRT18P32-201ENST00000424695 1287 ntBASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 AC005034.1-201ENST00000426657 489 ntBASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 FAM58DP-201ENST00000428076 619 ntBASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms