Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 HAUS4P1-201ENST00000406739 1145 ntBASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 SPDYE18-201ENST00000510091 1050 ntBASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SPDYE19P-201ENST00000338590 713 ntBASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPO2Q9UMS6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AC080080.1-201ENST00000625121 2420 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AC098614.1-201ENST00000368528 745 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 NME2P1-201ENST00000426182 414 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AL035252.4-201ENST00000624174 288 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 BNIP3P1-202ENST00000550043 1585 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms