Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 PPT1-215ENST00000641471 2368 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 AC006449.6-201ENST00000612330 2296 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ZNF259P1-201ENST00000407656 1365 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 AC009947.1-201ENST00000444350 727 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 AC034105.1-201ENST00000563488 319 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 AL139011.1-202ENST00000642063 584 ntBASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT11Q9UKZ1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 MIR574-201ENST00000385209 96 ntBASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 AC008667.4-201ENST00000607370 168 ntBASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT11Q9UKZ1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms