Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AL355306.1-201ENST00000415580 579 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 ADH5P3-201ENST00000433842 1137 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 MIR4321-201ENST00000592276 80 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AC092902.6-201ENST00000641783 218 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AL162727.3-201ENST00000635661 2787 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 MIR574-201ENST00000385209 96 ntBASIC16.3■□□□□ 0.2
TREX1Q9NSU2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AC040169.1-201ENST00000565382 521 ntBASIC16.3■□□□□ 0.2
TREX1Q9NSU2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TREX1Q9NSU2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 MCCD1P2-201ENST00000423228 335 ntBASIC16.29■□□□□ 0.2
TREX1Q9NSU2 KRT18P58-201ENST00000527480 1120 ntBASIC16.29■□□□□ 0.2
TREX1Q9NSU2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AL135744.1-201ENST00000565098 629 ntBASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TREX1Q9NSU2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms