Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 AL512652.2-201ENST00000625156 1716 ntBASIC17.28■□□□□ 0.36
TLR9Q9NR96 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 AC234783.1-201ENST00000441761 496 ntBASIC17.28■□□□□ 0.36
TLR9Q9NR96 AC007389.4-201ENST00000454674 793 ntBASIC17.28■□□□□ 0.36
TLR9Q9NR96 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
TLR9Q9NR96 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 AC098850.1-201ENST00000419919 790 ntBASIC17.27■□□□□ 0.36
TLR9Q9NR96 TMEM14DP-201ENST00000422205 345 ntBASIC17.27■□□□□ 0.36
TLR9Q9NR96 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 AC092658.1-201ENST00000505836 891 ntBASIC17.27■□□□□ 0.36
TLR9Q9NR96 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TLR9Q9NR96 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR9Q9NR96 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TLR9Q9NR96 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR9Q9NR96 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.27■□□□□ 0.35
TLR9Q9NR96 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
TLR9Q9NR96 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR9Q9NR96 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR9Q9NR96 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.27■□□□□ 0.35
TLR9Q9NR96 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TLR9Q9NR96 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR9Q9NR96 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 GPAA1P2-202ENST00000606848 1787 ntBASIC17.26■□□□□ 0.35
TLR9Q9NR96 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms