Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 AC107918.2-201ENST00000530817 355 ntBASIC17.31■□□□□ 0.36
CD248Q9HCU0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.31■□□□□ 0.36
CD248Q9HCU0 LINC01451-201ENST00000623792 534 ntBASIC17.31■□□□□ 0.36
CD248Q9HCU0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 LINC00304-203ENST00000565008 1864 ntBASIC17.31■□□□□ 0.36
CD248Q9HCU0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.3■□□□□ 0.36
CD248Q9HCU0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 AC022145.2-201ENST00000598203 171 ntBASIC17.3■□□□□ 0.36
CD248Q9HCU0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD248Q9HCU0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD248Q9HCU0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 TSEN15P1-201ENST00000423257 515 ntBASIC17.29■□□□□ 0.36
CD248Q9HCU0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 AC093028.1-201ENST00000622998 982 ntBASIC17.29■□□□□ 0.36
CD248Q9HCU0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD248Q9HCU0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD248Q9HCU0 AC126177.1-201ENST00000547829 2218 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms