Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 AL136982.4-201ENST00000437689 1740 ntBASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 AC098859.1-201ENST00000502915 1238 ntBASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 AL035252.4-201ENST00000624174 288 ntBASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 MIR648-201ENST00000385046 94 ntBASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 INGX-202ENST00000489074 768 ntBASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AC190387.1-201ENST00000551683 408 ntBASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KIAA1549Q9HCM3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AC104794.3-201ENST00000566840 1248 ntBASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AL132655.2-201ENST00000596276 594 ntBASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms