Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 MIR4321-201ENST00000592276 80 ntBASIC17.61■□□□□ 0.41
NXF3Q9H4D5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NXF3Q9H4D5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AC010336.2-201ENST00000564226 506 ntBASIC17.6■□□□□ 0.41
NXF3Q9H4D5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AC009118.2-201ENST00000613275 655 ntBASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AC004840.1-201ENST00000636359 365 ntBASIC17.6■□□□□ 0.41
NXF3Q9H4D5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
NXF3Q9H4D5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 AC015922.1-201ENST00000421102 1152 ntBASIC17.59■□□□□ 0.41
NXF3Q9H4D5 AL139010.1-201ENST00000454878 894 ntBASIC17.59■□□□□ 0.41
NXF3Q9H4D5 RN7SL618P-201ENST00000477850 296 ntBASIC17.59■□□□□ 0.41
NXF3Q9H4D5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 AL365330.1-201ENST00000607459 531 ntBASIC17.59■□□□□ 0.41
NXF3Q9H4D5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NXF3Q9H4D5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 AL136982.4-201ENST00000437689 1740 ntBASIC17.58■□□□□ 0.41
NXF3Q9H4D5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 PCDHA12-202ENST00000613593 2588 ntBASIC17.58■□□□□ 0.41
NXF3Q9H4D5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NXF3Q9H4D5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms