Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AC132872.4-202ENST00000622924 2756 ntBASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AC092474.2-201ENST00000424288 719 ntBASIC15.21■□□□□ 0.03
UBQLN3Q9H347 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AP000344.2-201ENST00000512987 629 ntBASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AL031055.1-201ENST00000606362 631 ntBASIC15.21■□□□□ 0.03
UBQLN3Q9H347 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 AC105339.1-204ENST00000636249 355 ntBASIC15.21■□□□□ 0.03
UBQLN3Q9H347 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN3Q9H347 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBQLN3Q9H347 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AL365203.3-201ENST00000609742 2057 ntBASIC15.2■□□□□ 0.02
UBQLN3Q9H347 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PMS2P4-201ENST00000412466 1052 ntBASIC15.2■□□□□ 0.02
UBQLN3Q9H347 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 CNN2P11-201ENST00000429351 262 ntBASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AL596442.2-201ENST00000610240 980 ntBASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AL161645.1-201ENST00000622716 1255 ntBASIC15.2■□□□□ 0.02
UBQLN3Q9H347 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.2■□□□□ 0.02
UBQLN3Q9H347 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms