Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KRT8-213ENST00000550170 2202 ntTSL 517.89■□□□□ 0.458e-6■□□□□ 10.8
XRN2Q9H0D6 FAM160B2-208ENST00000488968 2702 ntTSL 217.82■□□□□ 0.448e-6■□□□□ 10.8
XRN2Q9H0D6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.448e-6■□□□□ 10.8
XRN2Q9H0D6 C3-204ENST00000594936 625 ntTSL 217.75■□□□□ 0.436e-7■□□□□ 10.8
XRN2Q9H0D6 TBCD-218ENST00000575132 707 ntTSL 517.66■□□□□ 0.428e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-215ENST00000592578 549 ntTSL 417.64■□□□□ 0.418e-6■□□□□ 10.8
XRN2Q9H0D6 VARS-228ENST00000495010 1007 ntTSL 517.62■□□□□ 0.418e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-210ENST00000470831 1860 ntTSL 217.62■□□□□ 0.414e-11■□□□□ 10.8
XRN2Q9H0D6 RAPGEFL1-207ENST00000541245 382 ntTSL 317.54■□□□□ 0.48e-6■□□□□ 10.8
XRN2Q9H0D6 FAM160B2-203ENST00000450006 2846 ntTSL 1 (best)17.47■□□□□ 0.398e-6■□□□□ 10.8
XRN2Q9H0D6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.384e-14■□□□□ 10.8
XRN2Q9H0D6 VARS-227ENST00000489979 658 ntTSL 317.35■□□□□ 0.378e-6■□□□□ 10.8
XRN2Q9H0D6 TBCD-226ENST00000577051 979 ntTSL 517.35■□□□□ 0.378e-6■□□□□ 10.8
XRN2Q9H0D6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.378e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.24■□□□□ 0.358e-6■□□□□ 10.8
XRN2Q9H0D6 ARHGEF10L-207ENST00000482359 604 ntTSL 517.22■□□□□ 0.358e-6■□□□□ 10.8
XRN2Q9H0D6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.358e-6■□□□□ 10.8
XRN2Q9H0D6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.17■□□□□ 0.341e-9■□□□□ 10.8
XRN2Q9H0D6 AC002985.1-202ENST00000593484 584 ntAPPRIS P1 TSL 517■□□□□ 0.318e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.318e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-232ENST00000584024 1965 ntTSL 216.75■□□□□ 0.276e-7■□□□□ 10.8
XRN2Q9H0D6 LONP1-207ENST00000588589 684 ntTSL 216.71■□□□□ 0.276e-7■□□□□ 10.8
XRN2Q9H0D6 PHC2-208ENST00000473158 523 ntTSL 316.59■□□□□ 0.258e-6■□□□□ 10.8
XRN2Q9H0D6 CDC37-206ENST00000589629 728 ntTSL 316.43■□□□□ 0.224e-11■□□□□ 10.8
XRN2Q9H0D6 LIMK2-208ENST00000467301 607 ntTSL 316.39■□□□□ 0.218e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-208ENST00000586312 752 ntTSL 516.34■□□□□ 0.218e-6■□□□□ 10.8
XRN2Q9H0D6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.32■□□□□ 0.26e-7■□□□□ 10.8
XRN2Q9H0D6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.29■□□□□ 0.28e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.26e-7■□□□□ 10.8
XRN2Q9H0D6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.17■□□□□ 0.188e-6■□□□□ 10.8
XRN2Q9H0D6 ASXL1-211ENST00000619344 550 ntTSL 516.05■□□□□ 0.164e-11■□□□□ 10.8
XRN2Q9H0D6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.164e-11■□□□□ 10.8
XRN2Q9H0D6 RHOT2-218ENST00000568636 3098 ntTSL 216.02■□□□□ 0.163e-7■□□□□ 10.8
XRN2Q9H0D6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.9■□□□□ 0.148e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-204ENST00000428221 3139 ntTSL 1 (best)15.7■□□□□ 0.18e-6■□□□□ 10.8
XRN2Q9H0D6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.094e-14■□□□□ 10.8
XRN2Q9H0D6 BCAR1-212ENST00000563038 2692 ntTSL 1 (best)15.64■□□□□ 0.098e-6■□□□□ 10.8
XRN2Q9H0D6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.098e-6■□□□□ 10.8
XRN2Q9H0D6 BCAR1-218ENST00000566982 3024 ntTSL 215.62■□□□□ 0.098e-6■□□□□ 10.8
XRN2Q9H0D6 PCNP-202ENST00000460231 2165 ntTSL 1 (best)15.59■□□□□ 0.091e-12■□□□□ 10.8
XRN2Q9H0D6 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.53■□□□□ 0.088e-6■□□□□ 10.8
XRN2Q9H0D6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.071e-12■□□□□ 10.8
XRN2Q9H0D6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.068e-6■□□□□ 10.8
XRN2Q9H0D6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.066e-7■□□□□ 10.8
XRN2Q9H0D6 EIF3K-210ENST00000591409 583 ntTSL 315.4■□□□□ 0.061e-9■□□□□ 10.8
XRN2Q9H0D6 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.31■□□□□ 0.048e-6■□□□□ 10.8
XRN2Q9H0D6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.27■□□□□ 0.036e-7■□□□□ 10.8
XRN2Q9H0D6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.028e-6■□□□□ 10.8
XRN2Q9H0D6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.028e-6■□□□□ 10.8
XRN2Q9H0D6 TFEB-214ENST00000433032 168 ntTSL 1 (best)15.16■□□□□ 0.028e-6■□□□□ 10.8
XRN2Q9H0D6 FLII-207ENST00000478416 878 ntTSL 215.14■□□□□ 0.018e-6■□□□□ 10.8
XRN2Q9H0D6 PSMC5-207ENST00000580063 562 ntTSL 215.1■□□□□ 0.018e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.09■□□□□ 0.016e-7■□□□□ 10.8
XRN2Q9H0D6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.07■□□□□ 08e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.04■□□□□ -08e-6■□□□□ 10.8
XRN2Q9H0D6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.03■□□□□ -08e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.028e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-206ENST00000444832 3296 ntTSL 1 (best)14.91□□□□□ -0.028e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-211ENST00000579821 452 ntTSL 314.9□□□□□ -0.028e-6■□□□□ 10.8
XRN2Q9H0D6 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.038e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.87□□□□□ -0.038e-6■□□□□ 10.8
XRN2Q9H0D6 LPIN3-202ENST00000445975 808 ntTSL 514.87□□□□□ -0.034e-11■□□□□ 10.8
XRN2Q9H0D6 PSME3-213ENST00000592169 826 ntTSL 3 BASIC14.81□□□□□ -0.048e-6■□□□□ 10.8
XRN2Q9H0D6 NDUFA13-207ENST00000606722 502 ntTSL 314.78□□□□□ -0.041e-9■□□□□ 10.8
XRN2Q9H0D6 KRT8-203ENST00000546583 2862 ntTSL 514.74□□□□□ -0.058e-6■□□□□ 10.8
XRN2Q9H0D6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.62□□□□□ -0.077e-6■□□□□ 10.8
XRN2Q9H0D6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.087e-6■□□□□ 10.8
XRN2Q9H0D6 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC14.5□□□□□ -0.091e-9■□□□□ 10.8
XRN2Q9H0D6 C18orf25-202ENST00000588730 586 ntTSL 514.4□□□□□ -0.16e-7■□□□□ 10.8
XRN2Q9H0D6 TRMU-214ENST00000485559 2653 ntTSL 214.38□□□□□ -0.114e-11■□□□□ 10.8
XRN2Q9H0D6 PSMC5-219ENST00000584880 597 ntTSL 314.29□□□□□ -0.128e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-216ENST00000491612 2933 ntTSL 214.27□□□□□ -0.134e-11■□□□□ 10.8
XRN2Q9H0D6 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.136e-7■□□□□ 10.8
XRN2Q9H0D6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.138e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-208ENST00000579004 341 ntTSL 314.22□□□□□ -0.138e-6■□□□□ 10.8
XRN2Q9H0D6 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-9■□□□□ 10.8
XRN2Q9H0D6 KANSL3-207ENST00000444759 2717 ntTSL 214.17□□□□□ -0.148e-6■□□□□ 10.8
XRN2Q9H0D6 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.154e-11■□□□□ 10.8
XRN2Q9H0D6 PEX5-210ENST00000536883 575 ntTSL 414.09□□□□□ -0.158e-6■□□□□ 10.8
XRN2Q9H0D6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.08□□□□□ -0.168e-6■□□□□ 10.8
XRN2Q9H0D6 KANSL3-203ENST00000418735 594 ntTSL 414.06□□□□□ -0.168e-6■□□□□ 10.8
XRN2Q9H0D6 DNAJB6-205ENST00000437030 566 ntTSL 513.98□□□□□ -0.178e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC13.98□□□□□ -0.176e-7■□□□□ 10.8
XRN2Q9H0D6 FLII-229ENST00000584444 782 ntTSL 313.95□□□□□ -0.188e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-216ENST00000543974 548 ntTSL 513.78□□□□□ -0.28e-6■□□□□ 10.8
XRN2Q9H0D6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.211e-9■□□□□ 10.8
XRN2Q9H0D6 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.211e-9■□□□□ 10.8
XRN2Q9H0D6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.72□□□□□ -0.218e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC13.71□□□□□ -0.218e-6■□□□□ 10.8
XRN2Q9H0D6 ENGASE-201ENST00000300682 4626 ntTSL 513.64□□□□□ -0.231e-12■□□□□ 10.8
XRN2Q9H0D6 TFEB-216ENST00000445700 223 ntTSL 1 (best)13.59□□□□□ -0.238e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-233ENST00000584408 497 ntTSL 413.59□□□□□ -0.236e-7■□□□□ 10.8
XRN2Q9H0D6 FLII-205ENST00000473425 585 ntTSL 413.56□□□□□ -0.248e-6■□□□□ 10.8
XRN2Q9H0D6 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.248e-6■□□□□ 10.8
XRN2Q9H0D6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.256e-7■□□□□ 10.8
XRN2Q9H0D6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.45□□□□□ -0.268e-6■□□□□ 10.8
XRN2Q9H0D6 PSMC5-204ENST00000579031 772 ntTSL 213.41□□□□□ -0.268e-6■□□□□ 10.8
XRN2Q9H0D6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.278e-6■□□□□ 10.8
XRN2Q9H0D6 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.288e-6■□□□□ 10.8
XRN2Q9H0D6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.284e-14■□□□□ 10.8
Retrieved 100 of 21,068 protein–RNA pairs in 94 ms