Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 DUSP5P1-201ENST00000441325 1139 ntBASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 SAPCD2P3-201ENST00000455031 850 ntBASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 AC099063.4-201ENST00000641099 1602 ntBASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.66■□□□□ 0.26
PHACTR1Q9C0D0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 RNU1-129P-201ENST00000384064 167 ntBASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 U1.21-201ENST00000580816 167 ntBASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 MIR4515-201ENST00000584082 81 ntBASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHACTR1Q9C0D0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.64■□□□□ 0.26
PHACTR1Q9C0D0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
PHACTR1Q9C0D0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.26
PHACTR1Q9C0D0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 PMS2P4-201ENST00000412466 1052 ntBASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms