Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC063950.1-202ENST00000600133 568 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LINC01023-201ENST00000606054 436 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AL022326.1-202ENST00000641533 845 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC008677.1-201ENST00000519230 1561 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC112220.4-201ENST00000604982 1263 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AL591684.3-201ENST00000605187 298 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AL022328.3-201ENST00000607943 679 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AL589182.2-201ENST00000619332 1049 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AC002044.3-201ENST00000623314 541 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 AP000280.1-201ENST00000624800 832 ntBASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP3-1Q9BYR8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms