Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 FAAHP1-202ENST00000446499 1238 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 AC091304.2-201ENST00000564639 760 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 AC124864.1-201ENST00000623408 392 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PTENP1-202ENST00000532280 3996 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 AL353692.3-201ENST00000407031 1396 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.77□□□□□ -0.36
NDUFAF3Q9BU61 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 AC074051.2-201ENST00000565115 352 ntBASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 AC011840.4-201ENST00000578471 627 ntBASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFAF3Q9BU61 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFAF3Q9BU61 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms