Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 LINC00895-201ENST00000629028 1637 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 KRT18P27-201ENST00000427733 1299 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 HNRNPDP1-201ENST00000439535 754 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AC079781.3-201ENST00000449110 356 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AC087163.2-201ENST00000457299 853 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RN7SL510P-201ENST00000581311 263 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AL805961.1-202ENST00000641562 540 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AL662844.4-201ENST00000606367 2838 ntBASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRDL1Q9BU40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AL365203.3-201ENST00000609742 2057 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AC002310.6-201ENST00000624451 1377 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AC073621.1-201ENST00000392730 636 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AL450487.1-201ENST00000426799 995 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 RPS15P9-201ENST00000494093 319 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AC006538.1-201ENST00000567905 1585 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms