Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 MRPS18AP1-201ENST00000414458 589 ntBASIC19.02■□□□□ 0.64
SLF1Q9BQI6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 AC020765.3-201ENST00000613051 740 ntBASIC19.02■□□□□ 0.64
SLF1Q9BQI6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLF1Q9BQI6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLF1Q9BQI6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLF1Q9BQI6 OR6D1P-203ENST00000641209 4860 ntBASIC19.02■□□□□ 0.63
SLF1Q9BQI6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLF1Q9BQI6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLF1Q9BQI6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 MTND6P24-201ENST00000440466 518 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 AC093724.1-201ENST00000448659 1027 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 AL031731.1-201ENST00000642131 2094 ntBASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLF1Q9BQI6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19■□□□□ 0.63
SLF1Q9BQI6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SLF1Q9BQI6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19■□□□□ 0.63
SLF1Q9BQI6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLF1Q9BQI6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19■□□□□ 0.63
SLF1Q9BQI6 BANF1P1-201ENST00000553684 263 ntBASIC19■□□□□ 0.63
SLF1Q9BQI6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19■□□□□ 0.63
SLF1Q9BQI6 RN7SL828P-201ENST00000607615 303 ntBASIC19■□□□□ 0.63
SLF1Q9BQI6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLF1Q9BQI6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 PCDH8P1-201ENST00000428983 2773 ntBASIC19■□□□□ 0.63
SLF1Q9BQI6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms