Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 HLA-H-201ENST00000383620 1096 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 SPDYE14P-201ENST00000442619 822 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 AP001059.3-201ENST00000619053 235 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 AP3S2-216ENST00000617003 1561 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 U82695.1-201ENST00000635752 1889 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 RARRES2P9-201ENST00000565168 469 ntBASIC16.87■□□□□ 0.29
RPRD1AQ96P16 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPRD1AQ96P16 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 RNA5SP410-201ENST00000516285 106 ntBASIC16.86■□□□□ 0.29
RPRD1AQ96P16 AL512356.2-201ENST00000546955 174 ntBASIC16.86■□□□□ 0.29
RPRD1AQ96P16 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 MIR6080-201ENST00000617359 66 ntBASIC16.86■□□□□ 0.29
RPRD1AQ96P16 Z92544.3-201ENST00000624747 417 ntBASIC16.86■□□□□ 0.29
RPRD1AQ96P16 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms