Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 AC105021.1-202ENST00000570572 669 ntBASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 AC093512.1-201ENST00000617969 520 ntBASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 DUX4L27-201ENST00000554796 1261 ntBASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 AL133215.2-201ENST00000609242 977 ntBASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ECHDC3Q96DC8 AC006449.6-201ENST00000612330 2296 ntBASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MTHFR-217ENST00000641820 1569 ntBASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 AL158211.3-201ENST00000607385 239 ntBASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ECHDC3Q96DC8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ECHDC3Q96DC8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ECHDC3Q96DC8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
ECHDC3Q96DC8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms