Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AC005237.2-201ENST00000434368 219 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AL592309.1-201ENST00000443127 649 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AC025678.2-201ENST00000562061 970 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AL135744.1-201ENST00000565098 629 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 WASH6P-202ENST00000359512 1437 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 AC079140.1-201ENST00000508039 487 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 KRT8P48-201ENST00000515599 1220 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 IGHV3-62-201ENST00000520057 340 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 KRT8P23-201ENST00000560090 1207 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 AC021097.1-201ENST00000607902 574 ntBASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3KBP1Q96B97 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.19
SH3KBP1Q96B97 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 AL627223.1-201ENST00000416693 442 ntBASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 HLA-J-203ENST00000494367 1087 ntBASIC16.26■□□□□ 0.19
SH3KBP1Q96B97 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms