Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 LINC00982-205ENST00000420957 435 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 ACTG1P4-201ENST00000425123 1122 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 AC012615.1-201ENST00000565797 1299 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 AC092329.2-201ENST00000598402 547 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 AC093458.2-201ENST00000623150 629 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 AL161772.1-201ENST00000610494 4412 ntBASIC14.6□□□□□ -0.07
RFT1Q96AA3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.59□□□□□ -0.07
RFT1Q96AA3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 POM121L3P-201ENST00000419331 1163 ntBASIC14.59□□□□□ -0.07
RFT1Q96AA3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 ABCD1P5-201ENST00000445663 754 ntBASIC14.59□□□□□ -0.07
RFT1Q96AA3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 NPAP1P7-201ENST00000613027 823 ntBASIC14.59□□□□□ -0.07
RFT1Q96AA3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 C8orf49-201ENST00000525043 1968 ntBASIC14.59□□□□□ -0.07
RFT1Q96AA3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFT1Q96AA3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.59□□□□□ -0.07
RFT1Q96AA3 AL009178.2-201ENST00000597278 2719 ntBASIC14.58□□□□□ -0.07
RFT1Q96AA3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFT1Q96AA3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFT1Q96AA3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RFT1Q96AA3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RFT1Q96AA3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.58□□□□□ -0.07
RFT1Q96AA3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFT1Q96AA3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 BX005266.1-201ENST00000473402 457 ntBASIC14.58□□□□□ -0.08
RFT1Q96AA3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 MIR5100-201ENST00000579544 119 ntBASIC14.58□□□□□ -0.08
RFT1Q96AA3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 AL591684.3-201ENST00000605187 298 ntBASIC14.58□□□□□ -0.08
RFT1Q96AA3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.58□□□□□ -0.08
RFT1Q96AA3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms