Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 UPF3AP3-201ENST00000420996 769 ntBASIC14.41□□□□□ -0.1
TMEM54Q969K7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 IGHV3-62-201ENST00000520057 340 ntBASIC14.41□□□□□ -0.1
TMEM54Q969K7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 MIR4469-201ENST00000583919 79 ntBASIC14.41□□□□□ -0.1
TMEM54Q969K7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 AC010327.4-202ENST00000591484 748 ntBASIC14.41□□□□□ -0.1
TMEM54Q969K7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM54Q969K7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM54Q969K7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 AL592309.1-201ENST00000443127 649 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 AC024267.1-201ENST00000582320 895 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 AC084121.4-201ENST00000641598 221 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 AF228730.8-201ENST00000642140 221 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 AC024909.3-201ENST00000611513 2257 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PCDHA1-201ENST00000378133 2726 ntBASIC14.4□□□□□ -0.1
TMEM54Q969K7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM54Q969K7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AC018695.7-201ENST00000624587 2492 ntBASIC14.39□□□□□ -0.11
TMEM54Q969K7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AC069335.1-201ENST00000489972 472 ntBASIC14.39□□□□□ -0.11
TMEM54Q969K7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM54Q969K7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 AC022145.2-201ENST00000598203 171 ntBASIC14.39□□□□□ -0.11
TMEM54Q969K7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM54Q969K7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms