Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 PCDHA3-202ENST00000532566 4594 ntBASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 MIR648-201ENST00000385046 94 ntBASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AL031133.1-201ENST00000406807 723 ntBASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 MPDU1-223ENST00000582151 728 ntBASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 GPAA1P2-202ENST00000606848 1787 ntBASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AC069224.1-201ENST00000566372 1715 ntBASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CHCHD2P8-201ENST00000429873 447 ntBASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.42■□□□□ 0.22
RAB3IL1Q8TBN0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AL136038.3-201ENST00000561909 1096 ntBASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AC091167.2-201ENST00000579581 588 ntBASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AC010654.1-201ENST00000615722 808 ntBASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 AC079776.2-201ENST00000641154 1609 ntBASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IL1Q8TBN0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms