Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 FLJ16779-201ENST00000612722 7638 ntBASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLHC1Q8NHS4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 AC012569.1-201ENST00000591191 1524 ntBASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 AC092910.1-201ENST00000482027 1129 ntBASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 AL691432.3-201ENST00000621860 400 ntBASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLHC1Q8NHS4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 AL049840.3-201ENST00000602669 611 ntBASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ACTL9-202ENST00000612068 1252 ntBASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 AC010654.1-201ENST00000615722 808 ntBASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 FAM215A-202ENST00000632077 792 ntBASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLHC1Q8NHS4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 POU5F1P6-201ENST00000466990 990 ntBASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MIR4751-201ENST00000578027 74 ntBASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLHC1Q8NHS4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms