Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 AC104794.3-201ENST00000566840 1248 ntBASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 AL589739.1-201ENST00000607720 493 ntBASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF248Q8NDW4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 MTND6P24-201ENST00000440466 518 ntBASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 RAB43P1-201ENST00000561790 589 ntBASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 AL844908.2-201ENST00000609461 460 ntBASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF248Q8NDW4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 MIR658-201ENST00000385210 100 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 KRT17P8-201ENST00000540749 863 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 AC131009.4-201ENST00000624048 1740 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 AP001094.4-201ENST00000579008 2176 ntBASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF248Q8NDW4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF248Q8NDW4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms