Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AL442647.2-201ENST00000429864 857 ntBASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AL139010.1-201ENST00000454878 894 ntBASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 C2orf69P2-201ENST00000562032 1123 ntBASIC25.17■■□□□ 1.62
CFAP43Q8NDM7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 AC022211.2-201ENST00000585075 2527 ntBASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 ME2P1-201ENST00000426028 1970 ntBASIC25.16■■□□□ 1.62
CFAP43Q8NDM7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 RETN-203ENST00000629642 400 ntTSL 5 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CFAP43Q8NDM7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 RPL7P3-201ENST00000441388 714 ntBASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 AL158212.4-201ENST00000624062 1286 ntBASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 REXO1L8P-201ENST00000604378 1897 ntBASIC25.14■■□□□ 1.62
CFAP43Q8NDM7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CFAP43Q8NDM7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC005229.1-201ENST00000392885 409 ntBASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 GPAA1P2-201ENST00000417923 928 ntBASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms