Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC016027.1-202ENST00000607927 1699 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 MIR3909-201ENST00000579518 119 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC021097.1-201ENST00000607902 574 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AL355877.3-201ENST00000622820 899 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC092919.2-201ENST00000623631 1645 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC005622.1-201ENST00000636801 1703 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC104581.4-201ENST00000623126 3052 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 LAGE3P1-201ENST00000425356 484 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC245100.5-201ENST00000452108 331 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AL160237.2-201ENST00000556165 472 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AL049597.2-201ENST00000565575 961 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 MTDHP3-201ENST00000594186 672 ntBASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms