Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 MTHFR-217ENST00000641820 1569 ntBASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 POLD2P1-201ENST00000511220 997 ntBASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AP002472.1-201ENST00000577490 586 ntBASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 AL513523.2-202ENST00000427283 2040 ntBASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 NFIC-211ENST00000641145 8399 ntBASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC116Q8IYX3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AC016027.1-202ENST00000607927 1699 ntBASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 KRT18P34-201ENST00000488218 1270 ntBASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 KRT18P58-201ENST00000527480 1120 ntBASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AL078644.1-201ENST00000609881 752 ntBASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC116Q8IYX3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms