Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AC107918.2-201ENST00000530817 355 ntBASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 GGTLC5P-201ENST00000617623 998 ntBASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AP001350.2-201ENST00000625104 1094 ntBASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC50Q8IVM0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC50Q8IVM0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC50Q8IVM0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 AC136632.2-201ENST00000512891 861 ntBASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 AC087641.1-201ENST00000557561 1021 ntBASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 MIR1199-201ENST00000621445 119 ntBASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 AL596087.1-201ENST00000400979 1969 ntBASIC17.39■□□□□ 0.37
CCDC50Q8IVM0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 PCGF3-213ENST00000620529 1899 ntBASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms