Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 TARDBPP1-201ENST00000442013 1203 ntBASIC20.25■□□□□ 0.83
COL23A1Q86Y22 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AC015967.2-201ENST00000624092 234 ntBASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AC006435.4-201ENST00000625037 234 ntBASIC20.25■□□□□ 0.83
COL23A1Q86Y22 AL356737.1-201ENST00000634391 234 ntBASIC20.25■□□□□ 0.83
COL23A1Q86Y22 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL23A1Q86Y22 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 CNN2P8-201ENST00000421872 913 ntBASIC20.24■□□□□ 0.83
COL23A1Q86Y22 VDAC1P7-201ENST00000462417 847 ntBASIC20.24■□□□□ 0.83
COL23A1Q86Y22 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 AP001063.1-201ENST00000568332 529 ntBASIC20.24■□□□□ 0.83
COL23A1Q86Y22 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 AL008638.5-201ENST00000623814 1298 ntBASIC20.24■□□□□ 0.83
COL23A1Q86Y22 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.24■□□□□ 0.83
COL23A1Q86Y22 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 FXNP2-201ENST00000411625 547 ntBASIC20.23■□□□□ 0.83
COL23A1Q86Y22 CROCCP2-202ENST00000412962 2773 ntBASIC20.23■□□□□ 0.83
COL23A1Q86Y22 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 KRT18P64-201ENST00000434946 1219 ntBASIC20.23■□□□□ 0.83
COL23A1Q86Y22 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.23■□□□□ 0.83
COL23A1Q86Y22 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AC005622.1-201ENST00000636801 1703 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AC135050.7-201ENST00000624508 2218 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms