Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC134043.2-201ENST00000624206 2238 ntBASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AP006547.1-201ENST00000563435 692 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AL158212.4-201ENST00000624062 1286 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 EEF1DP1-201ENST00000585891 896 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC021097.1-201ENST00000607902 574 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC010503.4-201ENST00000615487 688 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC127024.7-201ENST00000625101 200 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC135050.7-201ENST00000624508 2218 ntBASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZFHX4Q86UP3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 AC244669.2-201ENST00000612320 853 ntBASIC15.08■□□□□ 0.01
ZFHX4Q86UP3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 HIST3H2BA-201ENST00000436555 524 ntBASIC15.08■□□□□ 0
ZFHX4Q86UP3 AL162726.2-201ENST00000438986 1017 ntBASIC15.08■□□□□ 0
ZFHX4Q86UP3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZFHX4Q86UP3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ZFHX4Q86UP3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms