Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AL512384.1-201ENST00000406683 331 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 ARSEP1-201ENST00000420443 635 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 GNAQP1-201ENST00000444815 1067 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AL589987.1-201ENST00000453380 819 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 INE1-201ENST00000456273 945 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 AL033527.5-202ENST00000641632 1098 ntBASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAI1Q7Z5J4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AC098614.1-201ENST00000368528 745 ntBASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AC008735.3-201ENST00000596646 500 ntBASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AL662844.4-201ENST00000606367 2838 ntBASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AL512652.2-201ENST00000625156 1716 ntBASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 AL589702.1-201ENST00000641229 1509 ntBASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAI1Q7Z5J4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SERBP1P3-201ENST00000459980 809 ntBASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 USP32P1-208ENST00000506594 1164 ntBASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AC106886.1-201ENST00000568660 600 ntBASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 PCDHA14-201ENST00000506751 2298 ntBASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AC084018.2-201ENST00000613093 2607 ntBASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms