Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 MPDU1-223ENST00000582151 728 ntBASIC14.88□□□□□ -0.03
SHFQ7M4L6 MTDHP3-201ENST00000594186 672 ntBASIC14.88□□□□□ -0.03
SHFQ7M4L6 AL121772.3-201ENST00000610840 674 ntBASIC14.88□□□□□ -0.03
SHFQ7M4L6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 AF228730.7-201ENST00000641842 219 ntBASIC14.88□□□□□ -0.03
SHFQ7M4L6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 KRT8P39-201ENST00000396270 1433 ntBASIC14.88□□□□□ -0.03
SHFQ7M4L6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PAWRP1-201ENST00000451083 565 ntBASIC14.87□□□□□ -0.03
SHFQ7M4L6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHFQ7M4L6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.86□□□□□ -0.03
SHFQ7M4L6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 MIR3652-201ENST00000579335 131 ntBASIC14.86□□□□□ -0.03
SHFQ7M4L6 MIR4492-201ENST00000581627 80 ntBASIC14.86□□□□□ -0.03
SHFQ7M4L6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 AL732292.2-201ENST00000609649 430 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms