Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 FDX1P1-201ENST00000449115 551 ntBASIC18.46■□□□□ 0.55
SHC4Q6S5L8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
SHC4Q6S5L8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.46■□□□□ 0.54
SHC4Q6S5L8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AL513190.1-201ENST00000621254 727 ntBASIC18.45■□□□□ 0.54
SHC4Q6S5L8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC4Q6S5L8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 SLC25A1P1-201ENST00000528351 927 ntBASIC18.44■□□□□ 0.54
SHC4Q6S5L8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms