Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 POM121L3P-201ENST00000419331 1163 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 TSPY12P-201ENST00000421279 868 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AL845331.1-201ENST00000424978 1190 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 KRT16P4-201ENST00000453883 522 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AC112698.1-201ENST00000510299 916 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AL662844.1-201ENST00000546340 181 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 KRT8P10-201ENST00000450021 1447 ntBASIC14.39□□□□□ -0.11
C11orf88Q6PI97 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C11orf88Q6PI97 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 SLC25A1P3-201ENST00000395415 828 ntBASIC14.38□□□□□ -0.11
C11orf88Q6PI97 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 RN7SL606P-201ENST00000472779 293 ntBASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ALOX12P2-203ENST00000570921 1945 ntBASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms