Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AL365209.1-201ENST00000624418 6473 ntBASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AC148477.5-201ENST00000625164 1645 ntBASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AC073347.1-201ENST00000421633 2643 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC097637.2-201ENST00000624096 1997 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC106881.1-201ENST00000605849 3329 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 ACTG1P4-201ENST00000425123 1122 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 FAAHP1-202ENST00000446499 1238 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 EMBP1-201ENST00000458200 901 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC073648.2-201ENST00000510116 352 ntBASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM53Q6P2H8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 NCF1C-201ENST00000438382 1427 ntBASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms